| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.071 | 0.643 | 0.214 | 0.071 |
| 2 | 0.214 | 0.357 | 0.357 | 0.071 |
| 3 | 0.071 | 0.071 | 0.071 | 0.786 |
| 4 | 0.643 | 0.0 | 0.143 | 0.214 |
| 5 | 0.429 | 0.143 | 0.143 | 0.286 |
| 6 | 0.214 | 0.071 | 0.214 | 0.5 |
| 7 | 0.286 | 0.071 | 0.286 | 0.357 |
| 8 | 0.071 | 0.071 | 0.5 | 0.357 |
| 9 | 0.071 | 0.214 | 0.357 | 0.357 |
| HOXA3 | BSX | MSX2 | EN2 | MSX1 | DLX5 | GBX1 | TLX2_var2 | SHOX | LBX2 | |
|---|---|---|---|---|---|---|---|---|---|---|
| HOXA3 | 100 | 71 | 70 | 70 | 69 | 67 | 66 | 66 | 66 | 66 |
| BSX | 71 | 100 | 94 | 94 | 95 | 93 | 93 | 80 | 74 | 94 |
| MSX2 | 70 | 94 | 100 | 96 | 99 | 96 | 96 | 81 | 77 | 97 |
| EN2 | 70 | 94 | 96 | 100 | 97 | 95 | 97 | 80 | 14 | 97 |
| MSX1 | 69 | 95 | 99 | 97 | 100 | 97 | 97 | 80 | 80 | 98 |
| DLX5 | 67 | 93 | 96 | 95 | 97 | 100 | 96 | 77 | 98 | 97 |
| GBX1 | 66 | 93 | 96 | 97 | 97 | 96 | 100 | 79 | 21 | 98 |
| TLX2_var2 | 66 | 80 | 81 | 80 | 80 | 77 | 79 | 100 | 79 | 78 |
| SHOX | 66 | 74 | 77 | 14 | 80 | 98 | 21 | 79 | 100 | 18 |
| LBX2 | 66 | 94 | 97 | 97 | 98 | 97 | 98 | 78 | 18 | 100 |