| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.164 | 0.445 | 0.259 | 0.132 |
| 2 | 0.071 | 0.58 | 0.011 | 0.337 |
| 3 | 0.457 | 0.281 | 0.249 | 0.013 |
| 4 | 0.868 | 0.019 | 0.106 | 0.006 |
| 5 | 0.0 | 0.0 | 0.0 | 1.0 |
| 6 | 0.011 | 0.0 | 0.0 | 0.989 |
| 7 | 1.0 | 0.0 | 0.0 | 0.0 |
| 8 | 0.314 | 0.268 | 0.274 | 0.144 |
| BSX | BARX1 | GSX1 | MSX1 | PDX1 | HOXB4 | HOXC5 | MSX2 | Dlx3 | LBX2 | |
|---|---|---|---|---|---|---|---|---|---|---|
| BSX | 100 | 98 | 96 | 95 | 94 | 94 | 94 | 94 | 94 | 94 |
| BARX1 | 98 | 100 | 67 | 95 | 94 | -8 | -7 | 94 | 95 | 70 |
| GSX1 | 96 | 67 | 100 | 93 | 97 | 94 | 94 | 28 | 79 | 95 |
| MSX1 | 95 | 95 | 93 | 100 | 93 | 89 | 89 | 99 | 98 | 98 |
| PDX1 | 94 | 94 | 97 | 93 | 100 | -2 | -2 | 92 | 96 | 10 |
| HOXB4 | 94 | -8 | 94 | 89 | -2 | 100 | 99 | 9 | 5 | 89 |
| HOXC5 | 94 | -7 | 94 | 89 | -2 | 99 | 100 | 87 | 5 | 89 |
| MSX2 | 94 | 94 | 28 | 99 | 92 | 9 | 87 | 100 | 97 | 97 |
| Dlx3 | 94 | 95 | 79 | 98 | 96 | 5 | 5 | 97 | 100 | 79 |
| LBX2 | 94 | 70 | 95 | 98 | 10 | 89 | 89 | 97 | 79 | 100 |