| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.27 | 0.247 | 0.278 | 0.206 |
| 2 | 0.122 | 0.48 | 0.159 | 0.239 |
| 3 | 0.048 | 0.501 | 0.033 | 0.418 |
| 4 | 0.806 | 0.091 | 0.087 | 0.015 |
| 5 | 0.855 | 0.083 | 0.037 | 0.025 |
| 6 | 0.0 | 0.009 | 0.038 | 0.953 |
| 7 | 0.041 | 0.07 | 0.079 | 0.81 |
| 8 | 0.912 | 0.01 | 0.032 | 0.045 |
| 9 | 0.33 | 0.145 | 0.379 | 0.146 |
| 10 | 0.241 | 0.326 | 0.246 | 0.187 |
| LBX2 | Shox2 | RAX2 | ESX1 | ISX | GBX1 | EN1 | MSX1 | HESX1 | GBX2 | |
|---|---|---|---|---|---|---|---|---|---|---|
| LBX2 | 100 | 99 | 99 | 99 | 99 | 98 | 98 | 98 | 98 | 98 |
| Shox2 | 99 | 100 | 99 | 98 | 99 | 98 | 99 | 98 | 98 | 98 |
| RAX2 | 99 | 99 | 100 | 99 | 99 | 97 | 98 | 98 | 98 | 98 |
| ESX1 | 99 | 98 | 99 | 100 | 98 | 98 | 98 | 97 | 98 | 98 |
| ISX | 99 | 99 | 99 | 98 | 100 | 98 | 98 | 98 | 98 | 98 |
| GBX1 | 98 | 98 | 97 | 98 | 98 | 100 | 98 | 97 | 98 | 97 |
| EN1 | 98 | 99 | 98 | 98 | 98 | 98 | 100 | 97 | 97 | 22 |
| MSX1 | 98 | 98 | 98 | 97 | 98 | 97 | 97 | 100 | 97 | 20 |
| HESX1 | 98 | 98 | 98 | 98 | 98 | 98 | 97 | 97 | 100 | 98 |
| GBX2 | 98 | 98 | 98 | 98 | 98 | 97 | 22 | 20 | 98 | 100 |