| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.233 | 0.137 | 0.602 | 0.028 |
| 2 | 0.048 | 0.545 | 0.024 | 0.384 |
| 3 | 0.632 | 0.251 | 0.117 | 0.0 |
| 4 | 0.836 | 0.009 | 0.134 | 0.022 |
| 5 | 0.059 | 0.032 | 0.032 | 0.878 |
| 6 | 0.503 | 0.015 | 0.0 | 0.482 |
| 7 | 0.911 | 0.009 | 0.0 | 0.08 |
| 8 | 0.933 | 0.034 | 0.0 | 0.034 |
| 9 | 0.638 | 0.086 | 0.132 | 0.145 |
| 10 | 0.426 | 0.144 | 0.097 | 0.333 |
| Hoxd9 | HOXA10 | HOXD13 | HOXA13 | HOXB13 | NKX6-3 | HOXC10 | Arid3b | HOXD4 | DLX5 | |
|---|---|---|---|---|---|---|---|---|---|---|
| Hoxd9 | 100 | 97 | 90 | 88 | 86 | 80 | 77 | 77 | 75 | 75 |
| HOXA10 | 97 | 100 | 93 | 91 | 88 | 80 | 82 | 72 | 70 | 71 |
| HOXD13 | 90 | 93 | 100 | 98 | 98 | 73 | 75 | 64 | 66 | 64 |
| HOXA13 | 88 | 91 | 98 | 100 | 98 | 71 | 69 | 62 | 67 | 63 |
| HOXB13 | 86 | 88 | 98 | 98 | 100 | 70 | 65 | 60 | 67 | 62 |
| NKX6-3 | 80 | 80 | 73 | 71 | 70 | 100 | 64 | 83 | 80 | 90 |
| HOXC10 | 77 | 82 | 75 | 69 | 65 | 64 | 100 | 58 | 39 | 48 |
| Arid3b | 77 | 72 | 64 | 62 | 60 | 83 | 58 | 100 | 81 | 81 |
| HOXD4 | 75 | 70 | 66 | 67 | 67 | 80 | 39 | 81 | 100 | 89 |
| DLX5 | 75 | 71 | 64 | 63 | 62 | 90 | 48 | 81 | 89 | 100 |