| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.074 | 0.744 | 0.139 | 0.043 |
| 2 | 0.032 | 0.772 | 0.004 | 0.192 |
| 3 | 0.645 | 0.232 | 0.003 | 0.121 |
| 4 | 0.944 | 0.007 | 0.013 | 0.035 |
| 5 | 0.0 | 0.003 | 0.0 | 0.997 |
| 6 | 0.888 | 0.007 | 0.008 | 0.097 |
| 7 | 0.994 | 0.0 | 0.0 | 0.006 |
| 8 | 0.967 | 0.027 | 0.0 | 0.006 |
| 9 | 0.723 | 0.143 | 0.044 | 0.09 |
| 10 | 0.355 | 0.365 | 0.069 | 0.211 |
| HOXB13 | HOXA13 | HOXD13 | HOXA10 | Hoxd9 | HOXB9 | NKX6-3 | NANOG | HOXD4 | HOXC13 | |
|---|---|---|---|---|---|---|---|---|---|---|
| HOXB13 | 100 | 98 | 98 | 88 | 86 | 86 | 70 | 69 | 67 | 66 |
| HOXA13 | 98 | 100 | 98 | 91 | 88 | 87 | 71 | 70 | 67 | 68 |
| HOXD13 | 98 | 98 | 100 | 93 | 90 | 90 | 73 | 64 | 66 | 73 |
| HOXA10 | 88 | 91 | 93 | 100 | 97 | 35 | 80 | 57 | 70 | 65 |
| Hoxd9 | 86 | 88 | 90 | 97 | 100 | 44 | 80 | 56 | 75 | 59 |
| HOXB9 | 86 | 87 | 90 | 35 | 44 | 100 | 24 | 22 | 28 | 21 |
| NKX6-3 | 70 | 71 | 73 | 80 | 80 | 24 | 100 | 40 | 80 | 46 |
| NANOG | 69 | 70 | 64 | 57 | 56 | 22 | 40 | 100 | 51 | 37 |
| HOXD4 | 67 | 67 | 66 | 70 | 75 | 28 | 80 | 51 | 100 | 24 |
| HOXC13 | 66 | 68 | 73 | 65 | 59 | 21 | 46 | 37 | 24 | 100 |