| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.288 | 0.199 | 0.248 | 0.266 |
| 2 | 0.307 | 0.12 | 0.155 | 0.418 |
| 3 | 0.132 | 0.167 | 0.077 | 0.624 |
| 4 | 0.57 | 0.06 | 0.193 | 0.177 |
| 5 | 0.836 | 0.006 | 0.067 | 0.09 |
| 6 | 0.091 | 0.019 | 0.056 | 0.834 |
| 7 | 0.171 | 0.137 | 0.305 | 0.388 |
| 8 | 0.473 | 0.077 | 0.324 | 0.125 |
| 9 | 0.17 | 0.322 | 0.306 | 0.203 |
| NKX6-3 | NKX6-2 | HOXA6 | MEOX2 | GSX2 | NKX6-1 | HOXB2 | HOXB4 | HOXC5 | OTP | |
|---|---|---|---|---|---|---|---|---|---|---|
| NKX6-3 | 100 | 97 | 96 | 95 | 94 | 94 | 94 | 94 | 93 | 93 |
| NKX6-2 | 97 | 100 | -2 | 10 | 27 | 98 | 15 | -5 | -6 | 94 |
| HOXA6 | 96 | -2 | 100 | 91 | 95 | 0 | 77 | 96 | 95 | -24 |
| MEOX2 | 95 | 10 | 91 | 100 | 92 | 8 | 94 | 90 | 85 | 93 |
| GSX2 | 94 | 27 | 95 | 92 | 100 | 24 | 97 | 94 | 94 | 13 |
| NKX6-1 | 94 | 98 | 0 | 8 | 24 | 100 | 12 | -4 | -4 | 93 |
| HOXB2 | 94 | 15 | 77 | 94 | 97 | 12 | 100 | 78 | 77 | 96 |
| HOXB4 | 94 | -5 | 96 | 90 | 94 | -4 | 78 | 100 | 99 | -20 |
| HOXC5 | 93 | -6 | 95 | 85 | 94 | -4 | 77 | 99 | 100 | -19 |
| OTP | 93 | 94 | -24 | 93 | 13 | 93 | 96 | -20 | -19 | 100 |