| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.276 | 0.17 | 0.357 | 0.197 |
| 2 | 0.174 | 0.126 | 0.603 | 0.096 |
| 3 | 0.018 | 0.45 | 0.007 | 0.525 |
| 4 | 0.563 | 0.304 | 0.069 | 0.064 |
| 5 | 0.853 | 0.046 | 0.073 | 0.027 |
| 6 | 0.042 | 0.001 | 0.0 | 0.957 |
| 7 | 0.694 | 0.01 | 0.014 | 0.282 |
| 8 | 0.944 | 0.004 | 0.009 | 0.043 |
| 9 | 0.891 | 0.06 | 0.013 | 0.035 |
| 10 | 0.595 | 0.148 | 0.111 | 0.146 |
| 11 | 0.36 | 0.249 | 0.147 | 0.244 |
| HOXA10 | Hoxd9 | HOXD13 | HOXA13 | HOXB13 | HOXC10 | NKX6-3 | HOXD11 | HOXC11 | Arid3b | |
|---|---|---|---|---|---|---|---|---|---|---|
| HOXA10 | 100 | 97 | 93 | 91 | 88 | 82 | 80 | 76 | 74 | 72 |
| Hoxd9 | 97 | 100 | 90 | 88 | 86 | 77 | 80 | 71 | 68 | 77 |
| HOXD13 | 93 | 90 | 100 | 98 | 98 | 75 | 73 | 68 | 66 | 64 |
| HOXA13 | 91 | 88 | 98 | 100 | 98 | 69 | 71 | 62 | 59 | 62 |
| HOXB13 | 88 | 86 | 98 | 98 | 100 | 65 | 70 | 58 | 56 | 60 |
| HOXC10 | 82 | 77 | 75 | 69 | 65 | 100 | 64 | 98 | 97 | 58 |
| NKX6-3 | 80 | 80 | 73 | 71 | 70 | 64 | 100 | 53 | 4 | 83 |
| HOXD11 | 76 | 71 | 68 | 62 | 58 | 98 | 53 | 100 | 98 | 50 |
| HOXC11 | 74 | 68 | 66 | 59 | 56 | 97 | 4 | 98 | 100 | 34 |
| Arid3b | 72 | 77 | 64 | 62 | 60 | 58 | 83 | 50 | 34 | 100 |