| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.051 | 0.047 | 0.854 | 0.048 |
| 2 | 0.362 | 0.169 | 0.344 | 0.124 |
| 3 | 0.041 | 0.889 | 0.041 | 0.029 |
| 4 | 0.934 | 0.0 | 0.066 | 0.0 |
| 5 | 0.004 | 0.996 | 0.0 | 0.0 |
| 6 | 0.014 | 0.038 | 0.948 | 0.0 |
| 7 | 0.018 | 0.061 | 0.0 | 0.92 |
| 8 | 0.0 | 0.018 | 0.966 | 0.016 |
| 9 | 0.025 | 0.529 | 0.065 | 0.381 |
| 10 | 0.158 | 0.483 | 0.212 | 0.147 |
| HEY2 | HEY1 | HEYL | HES5 | Hes2 | MNT | Npas2 | BHLHE40 | Mlxip | HES7 | |
|---|---|---|---|---|---|---|---|---|---|---|
| HEY2 | 100 | 98 | 97 | 94 | 93 | 91 | 91 | 90 | 90 | 90 |
| HEY1 | 98 | 100 | 96 | 93 | 92 | 94 | 94 | 92 | 94 | 90 |
| HEYL | 97 | 96 | 100 | 15 | 92 | 94 | 95 | 93 | 95 | 11 |
| HES5 | 94 | 93 | 15 | 100 | 86 | 83 | 80 | 84 | 15 | 98 |
| Hes2 | 93 | 92 | 92 | 86 | 100 | 88 | 90 | 87 | 89 | 83 |
| MNT | 91 | 94 | 94 | 83 | 88 | 100 | 96 | 94 | 97 | 80 |
| Npas2 | 91 | 94 | 95 | 80 | 90 | 96 | 100 | 91 | 98 | 77 |
| BHLHE40 | 90 | 92 | 93 | 84 | 87 | 94 | 91 | 100 | 93 | 82 |
| Mlxip | 90 | 94 | 95 | 15 | 89 | 97 | 98 | 93 | 100 | 13 |
| HES7 | 90 | 90 | 11 | 98 | 83 | 80 | 77 | 82 | 13 | 100 |