| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.01 | 0.01 | 0.01 | 0.971 |
| 2 | 0.01 | 0.01 | 0.01 | 0.971 |
| 3 | 0.01 | 0.971 | 0.01 | 0.01 |
| 4 | 0.971 | 0.01 | 0.01 | 0.01 |
| 5 | 0.01 | 0.01 | 0.01 | 0.971 |
| 6 | 0.01 | 0.01 | 0.01 | 0.971 |
| 7 | 0.01 | 0.01 | 0.971 | 0.01 |
| 8 | 0.971 | 0.01 | 0.01 | 0.01 |
| BBX | HBP1 | HOXD4 | Dux | MSX1 | RAX2 | MSX2 | Shox2 | LBX2 | LMX1A | |
|---|---|---|---|---|---|---|---|---|---|---|
| BBX | 100 | 88 | 77 | 70 | 64 | 64 | 64 | 64 | 64 | 64 |
| HBP1 | 88 | 100 | 68 | 24 | 62 | 62 | 60 | 62 | 61 | 61 |
| HOXD4 | 77 | 68 | 100 | 37 | 90 | 90 | 90 | 90 | 88 | 87 |
| Dux | 70 | 24 | 37 | 100 | 76 | 74 | 76 | 73 | 50 | 66 |
| MSX1 | 64 | 62 | 90 | 76 | 100 | 98 | 99 | 98 | 98 | 88 |
| RAX2 | 64 | 62 | 90 | 74 | 98 | 100 | 97 | 99 | 99 | 94 |
| MSX2 | 64 | 60 | 90 | 76 | 99 | 97 | 100 | 97 | 97 | 87 |
| Shox2 | 64 | 62 | 90 | 73 | 98 | 99 | 97 | 100 | 99 | 94 |
| LBX2 | 64 | 61 | 88 | 50 | 98 | 99 | 97 | 99 | 100 | 21 |
| LMX1A | 64 | 61 | 87 | 66 | 88 | 94 | 87 | 94 | 21 | 100 |