| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.136 | 0.073 | 0.717 | 0.074 |
| 2 | 0.027 | 0.104 | 0.176 | 0.693 |
| 3 | 0.068 | 0.39 | 0.061 | 0.481 |
| 4 | 0.197 | 0.203 | 0.356 | 0.244 |
| 5 | 0.017 | 0.818 | 0.045 | 0.12 |
| 6 | 0.0 | 0.958 | 0.0 | 0.042 |
| 7 | 0.587 | 0.188 | 0.034 | 0.191 |
| 8 | 0.065 | 0.054 | 0.045 | 0.837 |
| 9 | 0.283 | 0.0 | 0.717 | 0.0 |
| 10 | 0.087 | 0.0 | 0.913 | 0.0 |
| 11 | 0.134 | 0.8 | 0.006 | 0.06 |
| 12 | 0.839 | 0.0 | 0.114 | 0.047 |
| 13 | 0.974 | 0.0 | 0.026 | 0.0 |
| 14 | 0.0 | 1.0 | 0.0 | 0.0 |
| Rfx1 | MXI1_var2 | RFX3 | RFX2 | RFX5 | RFX4 | RFX6 | RFX8 | RFX7 | RBPJ | |
|---|---|---|---|---|---|---|---|---|---|---|
| Rfx1 | 100 | 97 | 93 | 92 | 92 | 91 | 85 | 83 | 82 | 55 |
| MXI1_var2 | 97 | 100 | 92 | 91 | 90 | 91 | 80 | 75 | 75 | 25 |
| RFX3 | 93 | 92 | 100 | 99 | 98 | 98 | 72 | 70 | 69 | 51 |
| RFX2 | 92 | 91 | 99 | 100 | 99 | 97 | 70 | 70 | 69 | 51 |
| RFX5 | 92 | 90 | 98 | 99 | 100 | 95 | 69 | 69 | 69 | 51 |
| RFX4 | 91 | 91 | 98 | 97 | 95 | 100 | 74 | 70 | 69 | 50 |
| RFX6 | 85 | 80 | 72 | 70 | 69 | 74 | 100 | 90 | 92 | 49 |
| RFX8 | 83 | 75 | 70 | 70 | 69 | 70 | 90 | 100 | 98 | 55 |
| RFX7 | 82 | 75 | 69 | 69 | 69 | 69 | 92 | 98 | 100 | 51 |
| RBPJ | 55 | 25 | 51 | 51 | 51 | 50 | 49 | 55 | 51 | 100 |