| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.103 | 0.421 | 0.301 | 0.174 |
| 2 | 0.019 | 0.001 | 0.98 | 0.001 |
| 3 | 0.002 | 0.003 | 0.001 | 0.994 |
| 4 | 0.129 | 0.058 | 0.001 | 0.812 |
| 5 | 0.295 | 0.018 | 0.6 | 0.088 |
| 6 | 0.001 | 0.894 | 0.006 | 0.099 |
| 7 | 0.0 | 0.784 | 0.0 | 0.215 |
| 8 | 0.971 | 0.004 | 0.006 | 0.018 |
| 9 | 0.016 | 0.006 | 0.002 | 0.976 |
| 10 | 0.205 | 0.0 | 0.794 | 0.0 |
| 11 | 0.132 | 0.008 | 0.859 | 0.0 |
| 12 | 0.095 | 0.58 | 0.025 | 0.3 |
| 13 | 0.81 | 0.002 | 0.084 | 0.104 |
| 14 | 0.994 | 0.001 | 0.003 | 0.002 |
| 15 | 0.0 | 0.978 | 0.0 | 0.021 |
| 16 | 0.186 | 0.282 | 0.421 | 0.111 |
| RFX2 | RFX5 | RFX3 | RFX4 | Rfx1 | MXI1_var2 | RFX6 | RFX8 | RFX7 | RBPJ | |
|---|---|---|---|---|---|---|---|---|---|---|
| RFX2 | 100 | 99 | 99 | 97 | 92 | 91 | 70 | 70 | 69 | 51 |
| RFX5 | 99 | 100 | 98 | 95 | 92 | 90 | 69 | 69 | 69 | 51 |
| RFX3 | 99 | 98 | 100 | 98 | 93 | 92 | 72 | 70 | 69 | 51 |
| RFX4 | 97 | 95 | 98 | 100 | 91 | 91 | 74 | 70 | 69 | 50 |
| Rfx1 | 92 | 92 | 93 | 91 | 100 | 97 | 85 | 83 | 82 | 55 |
| MXI1_var2 | 91 | 90 | 92 | 91 | 97 | 100 | 80 | 75 | 75 | 25 |
| RFX6 | 70 | 69 | 72 | 74 | 85 | 80 | 100 | 90 | 92 | 49 |
| RFX8 | 70 | 69 | 70 | 70 | 83 | 75 | 90 | 100 | 98 | 55 |
| RFX7 | 69 | 69 | 69 | 69 | 82 | 75 | 92 | 98 | 100 | 51 |
| RBPJ | 51 | 51 | 51 | 50 | 55 | 25 | 49 | 55 | 51 | 100 |