| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.114 | 0.023 | 0.864 | 0.0 |
| 2 | 0.057 | 0.068 | 0.091 | 0.784 |
| 3 | 0.068 | 0.545 | 0.0 | 0.386 |
| 4 | 0.102 | 0.091 | 0.523 | 0.284 |
| 5 | 0.0 | 0.852 | 0.023 | 0.125 |
| 6 | 0.0 | 0.955 | 0.0 | 0.045 |
| 7 | 0.614 | 0.205 | 0.068 | 0.114 |
| 8 | 0.08 | 0.136 | 0.068 | 0.716 |
| 9 | 0.136 | 0.0 | 0.864 | 0.0 |
| 10 | 0.136 | 0.0 | 0.864 | 0.0 |
| 11 | 0.011 | 0.943 | 0.0 | 0.045 |
| 12 | 0.83 | 0.011 | 0.125 | 0.034 |
| 13 | 0.989 | 0.0 | 0.011 | 0.0 |
| 14 | 0.0 | 1.0 | 0.0 | 0.0 |
| 15 | 0.25 | 0.42 | 0.33 | 0.0 |
| MXI1_var2 | Rfx1 | RFX3 | RFX2 | RFX4 | RFX5 | RFX6 | RFX7 | RFX8 | Hic1 | |
|---|---|---|---|---|---|---|---|---|---|---|
| MXI1_var2 | 100 | 97 | 92 | 91 | 91 | 90 | 80 | 75 | 75 | 55 |
| Rfx1 | 97 | 100 | 93 | 92 | 91 | 92 | 85 | 82 | 83 | -14 |
| RFX3 | 92 | 93 | 100 | 99 | 98 | 98 | 72 | 69 | 70 | 48 |
| RFX2 | 91 | 92 | 99 | 100 | 97 | 99 | 70 | 69 | 70 | 50 |
| RFX4 | 91 | 91 | 98 | 97 | 100 | 95 | 74 | 69 | 70 | 49 |
| RFX5 | 90 | 92 | 98 | 99 | 95 | 100 | 69 | 69 | 69 | 49 |
| RFX6 | 80 | 85 | 72 | 70 | 74 | 69 | 100 | 92 | 90 | 20 |
| RFX7 | 75 | 82 | 69 | 69 | 69 | 69 | 92 | 100 | 98 | 24 |
| RFX8 | 75 | 83 | 70 | 70 | 70 | 69 | 90 | 98 | 100 | 24 |
| Hic1 | 55 | -14 | 48 | 50 | 49 | 49 | 20 | 24 | 24 | 100 |