| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.21 | 0.307 | 0.264 | 0.219 |
| 2 | 0.23 | 0.242 | 0.168 | 0.36 |
| 3 | 0.219 | 0.167 | 0.063 | 0.55 |
| 4 | 0.491 | 0.121 | 0.216 | 0.172 |
| 5 | 0.862 | 0.024 | 0.049 | 0.065 |
| 6 | 0.071 | 0.119 | 0.129 | 0.68 |
| 7 | 0.138 | 0.118 | 0.179 | 0.565 |
| 8 | 0.336 | 0.093 | 0.482 | 0.089 |
| 9 | 0.244 | 0.214 | 0.364 | 0.177 |
| 10 | 0.225 | 0.291 | 0.195 | 0.289 |
| NOBOX | LHX1 | LHX5 | SHOX | RAX2 | MSX1 | EN2 | ESX1 | LBX2 | EN1 | |
|---|---|---|---|---|---|---|---|---|---|---|
| NOBOX | 100 | 95 | 95 | 95 | 95 | 95 | 94 | 94 | 94 | 94 |
| LHX1 | 95 | 100 | 100 | 5 | -27 | -29 | 11 | 18 | 17 | -28 |
| LHX5 | 95 | 100 | 100 | 5 | -27 | -29 | 11 | 18 | 17 | -28 |
| SHOX | 95 | 5 | 5 | 100 | 86 | 80 | 14 | 19 | 18 | 98 |
| RAX2 | 95 | -27 | -27 | 86 | 100 | 98 | 96 | 99 | 99 | 98 |
| MSX1 | 95 | -29 | -29 | 80 | 98 | 100 | 97 | 97 | 98 | 97 |
| EN2 | 94 | 11 | 11 | 14 | 96 | 97 | 100 | 97 | 97 | 97 |
| ESX1 | 94 | 18 | 18 | 19 | 99 | 97 | 97 | 100 | 99 | 98 |
| LBX2 | 94 | 17 | 17 | 18 | 99 | 98 | 97 | 99 | 100 | 98 |
| EN1 | 94 | -28 | -28 | 98 | 98 | 97 | 97 | 98 | 98 | 100 |