| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.051 | 0.568 | 0.038 | 0.344 |
| 2 | 0.096 | 0.164 | 0.03 | 0.71 |
| 3 | 0.887 | 0.041 | 0.036 | 0.036 |
| 4 | 0.97 | 0.011 | 0.012 | 0.006 |
| 5 | 0.012 | 0.014 | 0.007 | 0.966 |
| 6 | 0.055 | 0.047 | 0.061 | 0.837 |
| 7 | 0.722 | 0.027 | 0.178 | 0.073 |
| 8 | 0.194 | 0.262 | 0.27 | 0.275 |
| VSX1 | VSX2 | VAX1 | VAX2 | EMX2 | Lhx4 | EMX1 | PAX4 | UNCX | PDX1 | |
|---|---|---|---|---|---|---|---|---|---|---|
| VSX1 | 100 | 99 | 98 | 97 | 97 | 96 | 96 | 95 | 95 | 95 |
| VSX2 | 99 | 100 | 97 | 96 | 97 | 95 | 95 | 96 | 93 | 94 |
| VAX1 | 98 | 97 | 100 | 99 | 97 | 96 | 98 | 91 | 94 | 96 |
| VAX2 | 97 | 96 | 99 | 100 | 97 | 96 | 98 | 91 | 94 | 96 |
| EMX2 | 97 | 97 | 97 | 97 | 100 | 97 | 93 | 93 | 96 | 97 |
| Lhx4 | 96 | 95 | 96 | 96 | 97 | 100 | 96 | 92 | 97 | 96 |
| EMX1 | 96 | 95 | 98 | 98 | 93 | 96 | 100 | 92 | 89 | 87 |
| PAX4 | 95 | 96 | 91 | 91 | 93 | 92 | 92 | 100 | 91 | 90 |
| UNCX | 95 | 93 | 94 | 94 | 96 | 97 | 89 | 91 | 100 | 97 |
| PDX1 | 95 | 94 | 96 | 96 | 97 | 96 | 87 | 90 | 97 | 100 |