| Position | A | C | G | T | 
|---|---|---|---|---|
| 1 | 0.384 | 0.2 | 0.301 | 0.116 | 
| 2 | 0.416 | 0.005 | 0.314 | 0.264 | 
| 3 | 0.193 | 0.085 | 0.722 | 0.0 | 
| 4 | 0.0 | 0.656 | 0.0 | 0.344 | 
| 5 | 0.436 | 0.521 | 0.0 | 0.043 | 
| 6 | 1.0 | 0.0 | 0.0 | 0.0 | 
| 7 | 0.0 | 0.0 | 0.0 | 1.0 | 
| 8 | 1.0 | 0.0 | 0.0 | 0.0 | 
| 9 | 1.0 | 0.0 | 0.0 | 0.0 | 
| 10 | 1.0 | 0.0 | 0.0 | 0.0 | 
| 11 | 0.634 | 0.094 | 0.196 | 0.076 | 
| CDX2 | CDX1 | HOXB9 | HOXA6 | Arid3a | MNX1 | GSX2 | MEOX2 | NOBOX | GSX1 | |
|---|---|---|---|---|---|---|---|---|---|---|
| CDX2 | 100 | 97 | 93 | 75 | 72 | 70 | 65 | 64 | 62 | 60 | 
| CDX1 | 97 | 100 | 96 | 48 | 76 | 79 | 74 | 72 | 53 | 70 | 
| HOXB9 | 93 | 96 | 100 | 88 | 37 | 58 | 52 | 60 | 73 | 54 | 
| HOXA6 | 75 | 48 | 88 | 100 | 50 | 77 | 95 | 91 | 91 | 93 | 
| Arid3a | 72 | 76 | 37 | 50 | 100 | 81 | 83 | 74 | 59 | 78 | 
| MNX1 | 70 | 79 | 58 | 77 | 81 | 100 | 96 | 93 | 79 | 95 | 
| GSX2 | 65 | 74 | 52 | 95 | 83 | 96 | 100 | 92 | 78 | 99 | 
| MEOX2 | 64 | 72 | 60 | 91 | 74 | 93 | 92 | 100 | 84 | 92 | 
| NOBOX | 62 | 53 | 73 | 91 | 59 | 79 | 78 | 84 | 100 | 78 | 
| GSX1 | 60 | 70 | 54 | 93 | 78 | 95 | 99 | 92 | 78 | 100 |