| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2 | 0.8 | 0.0 | 0.0 |
| 2 | 0.95 | 0.0 | 0.05 | 0.0 |
| 3 | 0.0 | 1.0 | 0.0 | 0.0 |
| 4 | 0.0 | 0.0 | 1.0 | 0.0 |
| 5 | 0.0 | 0.0 | 0.0 | 1.0 |
| 6 | 0.0 | 0.0 | 1.0 | 0.0 |
| Arnt | Mlxip | Id2 | ID1 | Npas2 | MXI1 | HEYL | BHLHE40 | ARNTL2 | Mycn | |
|---|---|---|---|---|---|---|---|---|---|---|
| Arnt | 100 | 97 | 96 | 96 | 96 | 94 | 94 | 94 | 93 | 93 |
| Mlxip | 97 | 100 | 96 | 96 | 98 | 94 | 95 | 93 | 92 | 93 |
| Id2 | 96 | 96 | 100 | 100 | 96 | 92 | 95 | 95 | 95 | 91 |
| ID1 | 96 | 96 | 100 | 100 | 96 | 92 | 95 | 94 | 95 | 91 |
| Npas2 | 96 | 98 | 96 | 96 | 100 | 92 | 95 | 91 | 87 | 89 |
| MXI1 | 94 | 94 | 92 | 92 | 92 | 100 | 90 | 87 | 85 | 97 |
| HEYL | 94 | 95 | 95 | 95 | 95 | 90 | 100 | 93 | 92 | 90 |
| BHLHE40 | 94 | 93 | 95 | 94 | 91 | 87 | 93 | 100 | 96 | 87 |
| ARNTL2 | 93 | 92 | 95 | 95 | 87 | 85 | 92 | 96 | 100 | 88 |
| Mycn | 93 | 93 | 91 | 91 | 89 | 97 | 90 | 87 | 88 | 100 |