| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2 | 0.033 | 0.433 | 0.333 |
| 2 | 0.1 | 0.1 | 0.667 | 0.133 |
| 3 | 0.1 | 0.1 | 0.733 | 0.067 |
| 4 | 0.1 | 0.067 | 0.733 | 0.1 |
| 5 | 0.1 | 0.1 | 0.167 | 0.633 |
| 6 | 0.133 | 0.067 | 0.7 | 0.1 |
| 7 | 0.1 | 0.133 | 0.7 | 0.067 |
| 8 | 0.033 | 0.067 | 0.1 | 0.8 |
| 9 | 0.1 | 0.567 | 0.2 | 0.133 |
| ZIC2 | ZIC2_var2 | GLI1 | ZIC5 | GLIS3 | Klf12 | GLIS2 | ZIC4 | ZNF354C | ZNF740 | |
|---|---|---|---|---|---|---|---|---|---|---|
| ZIC2 | 100 | 97 | 90 | 74 | 68 | 67 | 66 | 61 | 61 | 60 |
| ZIC2_var2 | 97 | 100 | 86 | 76 | 68 | 66 | 68 | 63 | 61 | 67 |
| GLI1 | 90 | 86 | 100 | 27 | 27 | 17 | 30 | 24 | -2 | 39 |
| ZIC5 | 74 | 76 | 27 | 100 | 76 | 49 | 85 | 82 | 47 | 75 |
| GLIS3 | 68 | 68 | 27 | 76 | 100 | 24 | 92 | 71 | 4 | 33 |
| Klf12 | 67 | 66 | 17 | 49 | 24 | 100 | 26 | 42 | 5 | 34 |
| GLIS2 | 66 | 68 | 30 | 85 | 92 | 26 | 100 | 85 | 15 | 36 |
| ZIC4 | 61 | 63 | 24 | 82 | 71 | 42 | 85 | 100 | 12 | 16 |
| ZNF354C | 61 | 61 | -2 | 47 | 4 | 5 | 15 | 12 | 100 | 52 |
| ZNF740 | 60 | 67 | 39 | 75 | 33 | 34 | 36 | 16 | 52 | 100 |