| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.288 | 0.223 | 0.425 | 0.064 |
| 2 | 0.087 | 0.442 | 0.177 | 0.293 |
| 3 | 0.003 | 0.997 | 0.0 | 0.0 |
| 4 | 0.984 | 0.0 | 0.0 | 0.016 |
| 5 | 0.011 | 0.61 | 0.055 | 0.323 |
| 6 | 0.095 | 0.035 | 0.869 | 0.0 |
| 7 | 0.0 | 0.0 | 0.0 | 1.0 |
| 8 | 0.0 | 0.0 | 1.0 | 0.0 |
| 9 | 0.876 | 0.0 | 0.082 | 0.042 |
| 10 | 0.0 | 0.782 | 0.0 | 0.218 |
| 11 | 0.108 | 0.589 | 0.066 | 0.236 |
| USF1 | USF2 | TFEB | Arntl | ARNTL2 | BHLHE41 | Mitf | TFE3 | TFEC | MLXIPL | |
|---|---|---|---|---|---|---|---|---|---|---|
| USF1 | 100 | 97 | 94 | 93 | 93 | 91 | 90 | 90 | 90 | 88 |
| USF2 | 97 | 100 | 91 | 89 | 89 | 89 | 85 | 88 | 90 | 86 |
| TFEB | 94 | 91 | 100 | 96 | 96 | 96 | 93 | 98 | 97 | 96 |
| Arntl | 93 | 89 | 96 | 100 | 100 | 95 | 95 | 97 | 92 | 95 |
| ARNTL2 | 93 | 89 | 96 | 100 | 100 | 95 | 95 | 97 | 92 | 95 |
| BHLHE41 | 91 | 89 | 96 | 95 | 95 | 100 | 89 | 95 | 94 | 94 |
| Mitf | 90 | 85 | 93 | 95 | 95 | 89 | 100 | 95 | 90 | 90 |
| TFE3 | 90 | 88 | 98 | 97 | 97 | 95 | 95 | 100 | 96 | 96 |
| TFEC | 90 | 90 | 97 | 92 | 92 | 94 | 90 | 96 | 100 | 94 |
| MLXIPL | 88 | 86 | 96 | 95 | 95 | 94 | 90 | 96 | 94 | 100 |