| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.039 | 0.724 | 0.118 | 0.118 |
| 2 | 0.105 | 0.5 | 0.079 | 0.316 |
| 3 | 0.934 | 0.013 | 0.0 | 0.053 |
| 4 | 0.026 | 0.013 | 0.026 | 0.934 |
| 5 | 0.092 | 0.0 | 0.053 | 0.855 |
| 6 | 0.026 | 0.026 | 0.947 | 0.0 |
| 7 | 0.171 | 0.0 | 0.053 | 0.776 |
| 8 | 0.118 | 0.092 | 0.079 | 0.711 |
| 9 | 0.184 | 0.408 | 0.092 | 0.316 |
| SOX9 | Sox5 | SOX13 | Sox6 | NFYB | SOX15 | Sox1 | SOX18 | CUX1 | HMGA1 | |
|---|---|---|---|---|---|---|---|---|---|---|
| SOX9 | 100 | 91 | 89 | 88 | 71 | 65 | 65 | 64 | 63 | 62 |
| Sox5 | 91 | 100 | 95 | 11 | 25 | 7 | 4 | 6 | -6 | 31 |
| SOX13 | 89 | 95 | 100 | 17 | 6 | 4 | 6 | 11 | 15 | 29 |
| Sox6 | 88 | 11 | 17 | 100 | 1 | 38 | 38 | 3 | 43 | 54 |
| NFYB | 71 | 25 | 6 | 1 | 100 | 22 | 22 | 16 | 20 | 18 |
| SOX15 | 65 | 7 | 4 | 38 | 22 | 100 | 97 | 93 | -5 | -6 |
| Sox1 | 65 | 4 | 6 | 38 | 22 | 97 | 100 | 96 | -3 | -5 |
| SOX18 | 64 | 6 | 11 | 3 | 16 | 93 | 96 | 100 | -13 | -2 |
| CUX1 | 63 | -6 | 15 | 43 | 20 | -5 | -3 | -13 | 100 | 41 |
| HMGA1 | 62 | 31 | 29 | 54 | 18 | -6 | -5 | -2 | 41 | 100 |