PAX1

All Motif List Score Matrix

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Position Weight Matrix

Position	A	C	G	T
1	0.06	0.605	0.273	0.063
2	0.001	0.0	0.985	0.015
3	0.05	0.017	0.0	0.933
4	0.001	0.904	0.0	0.096
5	0.943	0.056	0.001	0.0
6	0.0	0.873	0.0	0.127
7	0.001	0.0	0.998	0.001
8	0.0	0.812	0.188	0.0
9	0.573	0.021	0.011	0.395
10	0.002	0.09	0.0	0.907
11	0.0	0.273	0.718	0.008
12	0.857	0.0	0.142	0.0
13	0.186	0.368	0.278	0.168
14	0.015	0.125	0.007	0.854
15	0.141	0.002	0.711	0.146
16	0.282	0.496	0.222	0.0
17	0.386	0.312	0.114	0.188

Download Position Weight Matrix

Related Motifs

	PAX1	PAX9	PAX5	Pax6	NPAS4	ZBTB1	AHR	AHRR	RARA::RXRA	T
PAX1	100	99	83	82	59	57	53	53	50	49
PAX9	99	100	83	81	58	55	54	54	49	52
PAX5	83	83	100	68	50	46	48	48	9	40
Pax6	82	81	68	100	53	58	9	9	16	26
NPAS4	59	58	50	53	100	-3	-1	-1	0	20
ZBTB1	57	55	46	58	-3	100	11	11	16	-2
AHR	53	54	48	9	-1	11	100	100	0	28
AHRR	53	54	48	9	-1	11	100	100	0	28
RARA::RXRA	50	49	9	16	0	16	0	0	100	30
T	49	52	40	26	20	-2	28	28	30	100