HOXC6

All Motif List Score Matrix

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Position Weight Matrix

Position	A	C	G	T
1	0.788	0.171	0.021	0.021
2	1.0	0.0	0.0	0.0
3	0.85	0.0	0.0	0.15
4	0.083	0.15	0.767	0.0
5	0.15	0.042	0.083	0.725
6	0.85	0.15	0.0	0.0
7	1.0	0.0	0.0	0.0
8	0.0	0.0	0.0	1.0
9	0.85	0.15	0.0	0.0
10	1.0	0.0	0.0	0.0
11	1.0	0.0	0.0	0.0
12	0.0	0.0	0.0	1.0
13	0.0	1.0	0.0	0.0
14	1.0	0.0	0.0	0.0
15	0.171	0.146	0.021	0.663

Download Position Weight Matrix

Related Motifs

	HOXC6	Hoxa9	Hoxc9	HOXB7	HOXB6	HOXB8	ZFHX3_var2	Arid3b	JUN(var.2)	CUX1
HOXC6	100	77	76	75	73	73	66	61	60	59
Hoxa9	77	100	95	89	-16	43	42	54	-13	62
Hoxc9	76	95	100	82	79	80	-7	60	56	-12
HOXB7	75	89	82	100	91	99	66	74	61	-2
HOXB6	73	-16	79	91	100	89	32	58	32	-17
HOXB8	73	43	80	99	89	100	65	76	59	0
ZFHX3_var2	66	42	-7	66	32	65	100	68	21	56
Arid3b	61	54	60	74	58	76	68	100	42	22
JUN(var.2)	60	-13	56	61	32	59	21	42	100	-16
CUX1	59	62	-12	-2	-17	0	56	22	-16	100