| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.133 | 0.867 | 0.0 | 0.0 |
| 2 | 0.438 | 0.0 | 0.312 | 0.25 |
| 3 | 0.0 | 0.438 | 0.312 | 0.25 |
| 4 | 0.375 | 0.0 | 0.062 | 0.562 |
| 5 | 0.875 | 0.0 | 0.0 | 0.125 |
| 6 | 0.875 | 0.0 | 0.125 | 0.0 |
| 7 | 0.0 | 0.0 | 0.0 | 1.0 |
| 8 | 0.0 | 0.062 | 0.375 | 0.562 |
| HOXA5 | GSX1 | GBX1 | ISL1 | LHX1 | LHX5 | Gfi1 | HOXC10 | ETV2 | HOXC11 | |
|---|---|---|---|---|---|---|---|---|---|---|
| HOXA5 | 100 | 78 | 77 | 71 | 69 | 69 | 59 | 55 | 53 | 52 |
| GSX1 | 78 | 100 | 94 | 22 | 7 | 7 | -12 | 13 | -2 | 32 |
| GBX1 | 77 | 94 | 100 | 13 | 14 | 14 | -5 | 13 | -2 | 30 |
| ISL1 | 71 | 22 | 13 | 100 | 38 | 38 | 31 | 44 | 38 | 44 |
| LHX1 | 69 | 7 | 14 | 38 | 100 | 100 | 56 | 50 | -4 | 38 |
| LHX5 | 69 | 7 | 14 | 38 | 100 | 100 | 56 | 50 | -4 | 38 |
| Gfi1 | 59 | -12 | -5 | 31 | 56 | 56 | 100 | 14 | 16 | 6 |
| HOXC10 | 55 | 13 | 13 | 44 | 50 | 50 | 14 | 100 | 38 | 97 |
| ETV2 | 53 | -2 | -2 | 38 | -4 | -4 | 16 | 38 | 100 | 42 |
| HOXC11 | 52 | 32 | 30 | 44 | 38 | 38 | 6 | 97 | 42 | 100 |