Information for DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer (Motif 65)

A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
Reverse Opposite:
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G
p-value:1e-2240
log p-value:-5.159e+03
FDR:NA
Information Content per bp:1.720
Number of Target Sequences with motif585.0
Percentage of Target Sequences with motif34.37%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
BCWGATTCAATCAAN
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
-ATGATCGAATCAAA
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
-CTAATTTAATCAA-
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-BCWGATTCAATCAAN----
NDBAGATRWTATCTVNNNNN
 A C G T A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

PB0125.1_Gata3_2/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----BCWGATTCAATCAAN---
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
--TAATTTAATCA--
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:BCWGATTCAATCAAN
--TGATGCAATC---
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T A C G T A C G T T A C G C G T A A G C T A C T G G T A C C G T A G T C A A G C T G A T C A C G T A C G T A C G T

At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.74
Offset:4
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
----ATTTAATG---
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T A C G T A C G T A C G T C T G A C G A T A C G T G C A T C G T A C G T A A C G T A C T G A C G T A C G T A C G T

WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.72
Offset:3
Orientation:forward strand
Alignment:BCWGATTCAATCAAN
---CAWTCATTCA--
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A
A C G T A C G T A C G T G T A C G C T A C G A T C A G T A G T C G C T A C G A T C G A T A G T C G C T A A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:BCWGATTCAATCAAN--
-GAAGATCAATCACTAA
 A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A A C G T A C G T
A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A