Information for DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer (Motif 54)

A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A
Reverse Opposite:
G A C T T C G A C G T A C G A T A G C T C T G A A T C G T C A G T A C G T A G C
p-value:1e-1455
log p-value:-3.352e+03
FDR:NA
Information Content per bp:1.517
Number of Target Sequences with motif5767.0
Percentage of Target Sequences with motif33.02%
Number of Background Sequences with motif3070.6
Percentage of Background Sequences with motif10.19%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NSNNTAATTA
NSNNTAATTA
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A
A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A

DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:forward strand
Alignment:NSNNTAATTA-
-NNNTAATTAS
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T A T C G A T C G A T G C G A C T T C G A C G T A G C A T A G C T C T G A T A C G

En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NSNNTAATTA-
-NDCTAATTAS
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:4
Score:0.97
Offset:2
Orientation:forward strand
Alignment:NSNNTAATTA
--SSTAATTA
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A
A C G T A C G T A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A

HOXA1/MA1495.1/Jaspar

Match Rank:5
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:NSNNTAATTA-
---NTAATTAN
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T A C G T A C G T T A C G A G C T T G C A C G T A A C G T A C G T C T G A T A G C

Lhx8/MA0705.1/Jaspar

Match Rank:6
Score:0.96
Offset:3
Orientation:forward strand
Alignment:NSNNTAATTA-
---CTAATTAG
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G

HOXC8/MA1505.1/Jaspar

Match Rank:7
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:NSNNTAATTA-
---GTAATTAC
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T A C G T A C G T C A T G A G C T G T C A G T C A A C G T C A G T C T G A G T A C

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:8
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:NSNNTAATTA---
---YTAATTARNN
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T T G C A G T C A A C G T A C G T C T G A T C A G G T A C G C A T

Lim3/MA0195.1/Jaspar

Match Rank:9
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:NSNNTAATTA-
----TAATTAA
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A A C G T
A C G T A C G T A C G T A C G T A G C T T G C A C G T A A C G T G A C T C G T A C T G A

en/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.95
Offset:4
Orientation:forward strand
Alignment:NSNNTAATTA
----TAATTA
 A T C G A T G C A G T C T A G C G A C T T C G A G C T A G C A T A G C T C T G A
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C G A T C A G T C T G A