Information for COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer (Motif 45)

T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
Reverse Opposite:
G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C
p-value:1e-2785
log p-value:-6.415e+03
FDR:NA
Information Content per bp:1.602
Number of Target Sequences with motif8129.0
Percentage of Target Sequences with motif36.27%
Number of Background Sequences with motif2379.7
Percentage of Background Sequences with motif8.78%
Average Position of motif in Targets49.9 +/- 23.9bp
Average Position of motif in Background49.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GKBCARAGGTCA
GKBCARAGGTCA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GKBCARAGGTCA
NRBCARRGGTCA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.96
Offset:4
Orientation:forward strand
Alignment:GKBCARAGGTCA
----AGRGGTCA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.94
Offset:4
Orientation:forward strand
Alignment:GKBCARAGGTCA-
----CGAGGTCAC
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.93
Offset:4
Orientation:forward strand
Alignment:GKBCARAGGTCA
----TRAGGTCA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.93
Offset:5
Orientation:forward strand
Alignment:GKBCARAGGTCA-
-----GAGGTCAT
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.93
Offset:3
Orientation:forward strand
Alignment:GKBCARAGGTCA----
---CAAAGGTCAAGGG
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.93
Offset:3
Orientation:forward strand
Alignment:GKBCARAGGTCA--
---CAAAGGTCAAA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.92
Offset:6
Orientation:forward strand
Alignment:GKBCARAGGTCA
------AGGTCA
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GKBCARAGGTCA----
TCTCAAAGGTCACGAG
 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G