Information for ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer (Motif 423)

A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
Reverse Opposite:
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C
p-value:1e-159
log p-value:-3.662e+02
FDR:NA
Information Content per bp:1.722
Number of Target Sequences with motif224.0
Percentage of Target Sequences with motif46.67%
Number of Background Sequences with motif2117.3
Percentage of Background Sequences with motif4.76%
Average Position of motif in Targets51.1 +/- 22.9bp
Average Position of motif in Background49.3 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GRTGMTRGAGCC
GRTGMTRGAGCC
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

ZBTB6/MA1581.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GRTGMTRGAGCC--
-GTCCTTGAGCCCG
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T
A C G T C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GRTGMTRGAGCC
---GATGGAGT-
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.67
Offset:7
Orientation:forward strand
Alignment:GRTGMTRGAGCC
-------CAGCC
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GRTGMTRGAGCC
-----CGGAGC-
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GRTGMTRGAGCC---
-----AGGAGCGTND
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C A G A C T G G T C A A C T G A G T C A T C G A C G T A C T G C G A T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GRTGMTRGAGCC
--TGATGGAW--
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T

SNT2/MA0384.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GRTGMTRGAGCC-
--TGGTAGCGCCG
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C T G T C A G A C G T C T G A C T A G A G T C A C T G T A G C G T A C C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GRTGMTRGAGCC---
NGNTCTAGAACCNGV
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

ZBTB12/MA1649.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GRTGMTRGAGCC-
--ATCTGGAACCC
 A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T
A C G T A C G T T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C