Information for Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer (Motif 383)

A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
Reverse Opposite:
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A
p-value:1e-1163
log p-value:-2.679e+03
FDR:NA
Information Content per bp:1.569
Number of Target Sequences with motif16487.0
Percentage of Target Sequences with motif31.73%
Number of Background Sequences with motif9479.3
Percentage of Background Sequences with motif18.36%
Average Position of motif in Targets50.8 +/- 24.7bp
Average Position of motif in Background50.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGTCANYT
TGTCANYT
 A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-TGTCANYT
YTGWCADY-
 A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGTCANYT
NCTGTCANNT
 A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
T C A G A T G C A C G T A C T G A C G T A G T C C G T A G C T A G A C T C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGTCANYT
VBTGWCAGCB
 A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

vis/MA0252.1/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGTCANYT
CTGTCA---
 A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
A T G C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGTCANYT
NTGTCAN--
 A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

achi/MA0207.1/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TGTCANYT
CTGTCA---
 A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
G A T C A C G T C T A G A C G T A G T C C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTCANYT
CCTGTCAA--
 A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TGTCANYT
NCTGTCANAG
 A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
A T C G G T A C A G C T A C T G A C G T A G T C C G T A G T A C G T C A C A T G

hth/MA0227.1/Jaspar

Match Rank:10
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-TGTCANYT
CTGTCA---
 A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T
G T A C A G C T A C T G A C G T A G T C C G T A A C G T A C G T A C G T