Information for Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer (Motif 371)

C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G
Reverse Opposite:
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T
p-value:
log p-value:-1.786e+03
FDR:0.000
Information Content per bp:1.776
Number of Target Sequences with motif
Percentage of Target Sequences with motif
Number of Background Sequences with motif
Percentage of Background Sequences with motif
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGG
ACATCAAAGG
 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:ACATCAAAGG
ASATCAAAGG
 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGG
ACWTCAAAGG
 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGG--
ACATCAAAGGNA
 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--ACATCAAAGG--
AAAGATCAAAGGAA
 A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ACATCAAAGG-
ANATCAAAGNN
 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---ACATCAAAGG
VSCACATCAAAG-
 A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---ACATCAAAGG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---ACATCAAAGG----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---ACATCAAAGG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A