Information for Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer (Motif 369)

T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
Reverse Opposite:
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T
p-value:
log p-value:-1.923e+03
FDR:0.000
Information Content per bp:1.718
Number of Target Sequences with motif
Percentage of Target Sequences with motif
Number of Background Sequences with motif
Percentage of Background Sequences with motif
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NCAGCTGCTG
NCAGCTGCTG
 T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MYOG/MA0500.2/Jaspar

Match Rank:2
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--NCAGCTGCTG
CAGCAGCTGCTG
 A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NCAGCTGCTG-
AGCAGCTGCTNN
 A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NCAGCTGCTG
CGCAGCTGCG-
 A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NCAGCTGCTG
NNACAGCTGC--
 A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

BHLHA15(var.2)/MA1472.1/Jaspar

Match Rank:6
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-NCAGCTGCTG
NACAGCTGTT-
 A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
T C G A T C G A A G T C C G T A A C T G T G A C C G A T C A T G A C G T A G C T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NCAGCTGCTG
ACAGCTGTTN
 T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NCAGCTGCTG
ACAGCTGTTV
 T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-NCAGCTGCTG
AGCAGCTGCT-
 A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NCAGCTGCTG
-CAGCTGTT-
 T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T