Information for Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer (Motif 368)

C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
Reverse Opposite:
A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C
p-value:1e-3550
log p-value:-8.175e+03
FDR:NA
Information Content per bp:1.609
Number of Target Sequences with motif6275.0
Percentage of Target Sequences with motif40.73%
Number of Background Sequences with motif1906.0
Percentage of Background Sequences with motif5.63%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:DAGGTGTBAA
DAGGTGTBAA
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:DAGGTGTBAA
-AGGTGTCA-
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:DAGGTGTBAA-
AAGGTGTGAAA
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX6/MA1567.1/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:DAGGTGTBAA
GAGGTGTGAA
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:DAGGTGTBAA-
-AGGTGTTAAT
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DAGGTGTBAA
-AGGTGTGA-
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DAGGTGTBAA-
-AGGTGTGAAM
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX18/MA1565.1/Jaspar

Match Rank:8
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-DAGGTGTBAA-
GGAGGTGTGAAA
 A C G T C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DAGGTGTBAA
-AGGTGTGA-
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.92
Offset:1
Orientation:forward strand
Alignment:DAGGTGTBAA-
-AGGTGTGAAA
 C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A