Information for Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer (Motif 362)

C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
Reverse Opposite:
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T
p-value:1e-376
log p-value:-8.674e+02
FDR:NA
Information Content per bp:1.655
Number of Target Sequences with motif3498.0
Percentage of Target Sequences with motif10.44%
Number of Background Sequences with motif1549.9
Percentage of Background Sequences with motif4.86%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGAAM
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAM
AAGGTGTGAAA
 A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGAAA
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGAAA
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGA--
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAM--
AAGGTGTGAAAAT
 A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX6/MA1567.1/Jaspar

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAAM
GAGGTGTGAA-
 A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGA--
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGA--
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGA--
 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T