p-value: | |
log p-value: | -3.736e+03 |
FDR: | 0.000 |
Information Content per bp: | 1.682 |
Number of Target Sequences with motif | |
Percentage of Target Sequences with motif | |
Number of Background Sequences with motif | |
Percentage of Background Sequences with motif | |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCATATATGGNA CCATATATGGNA |
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PB0078.1_Srf_1/Jaspar
Match Rank: | 2 |
Score: | 0.97 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCATATATGGNA TTCCATATATGGAA |
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MF0008.1_MADS_class/Jaspar
Match Rank: | 3 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCATATATGGNA CCATATATGG-- |
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SRF/MA0083.3/Jaspar
Match Rank: | 4 |
Score: | 0.88 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCATATATGGNA- TGNCCATATATGGTCA |
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SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer
Match Rank: | 5 |
Score: | 0.85 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCATATATGGNA CCAWAWWTGGWA |
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TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer
Match Rank: | 6 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCATATATGGNA CCAAAAATRG-- |
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AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer
Match Rank: | 7 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCATATATGGNA CCAWWWTTGGAA |
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AGL2(MADS)/Arabidopsis thaliana/AthaMap
Match Rank: | 8 |
Score: | 0.81 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCATATATGGNA-- CTTACCATATATAGAAAT |
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SEP1/MA0584.1/Jaspar
Match Rank: | 9 |
Score: | 0.81 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCATATATGGNA-- CTTACCATATATAGAAAT |
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AGL3(MADS)/Arabidopsis thaliana/AthaMap
Match Rank: | 10 |
Score: | 0.80 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCATATATGGNA-- NTTNCTATATATGGAAAN |
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