Information for Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer (Motif 342)

T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
Reverse Opposite:
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G
p-value:1e-619
log p-value:-1.427e+03
FDR:NA
Information Content per bp:1.672
Number of Target Sequences with motif620.0
Percentage of Target Sequences with motif32.26%
Number of Background Sequences with motif707.0
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:VVRRAACAATGG
VVRRAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.98
Offset:2
Orientation:reverse strand
Alignment:VVRRAACAATGG
--VRAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.97
Offset:3
Orientation:forward strand
Alignment:VVRRAACAATGG-
---RAACAATGGN
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.96
Offset:3
Orientation:forward strand
Alignment:VVRRAACAATGG--
---AAACAATGGCA
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:VVRRAACAATGG
---GAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:VVRRAACAATGG-
---GAACAATGGN
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

SOX8/MA0868.2/Jaspar

Match Rank:7
Score:0.95
Offset:2
Orientation:forward strand
Alignment:VVRRAACAATGG
--AGAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.95
Offset:3
Orientation:forward strand
Alignment:VVRRAACAATGG--
---AAACAATGGAA
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:VVRRAACAATGG
--AAAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:VVRRAACAATGG
--RNAACAATGG
 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G