Information for Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer (Motif 333)

A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T
Reverse Opposite:
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A
p-value:1e-619
log p-value:-1.427e+03
FDR:NA
Information Content per bp:1.596
Number of Target Sequences with motif955.0
Percentage of Target Sequences with motif70.53%
Number of Background Sequences with motif4428.5
Percentage of Background Sequences with motif9.97%
Average Position of motif in Targets50.1 +/- 24.3bp
Average Position of motif in Background49.5 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TRCACCTGCY
TRCACCTGCY
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T

SNAI1/MA1558.1/Jaspar

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:TRCACCTGCY
NGCACCTGCN
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

esg/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TRCACCTGCY-
NNGCACCTGTNN
 A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T
A T G C G A C T T C A G A T G C C G T A A G T C G A T C A C G T C A T G G A C T A G C T C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TRCACCTGCY-
SNGCACCTGCHS
 A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TRCACCTGCY
NNCACCTGNN
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:6
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TRCACCTGCY--
CAGCACCTGCCCC
 A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TRCACCTGCY-
CGCACCTGCCG
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

SNAI3/MA1559.1/Jaspar

Match Rank:8
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TRCACCTGCY
TGCACCTGTT
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T
A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TRCACCTGCY-
CGCACCTGCCC
 A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

TCF4/MA0830.2/Jaspar

Match Rank:10
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TRCACCTGCY--
CGGCACCTGCCCC
 A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C