p-value: | 1e-625 |
log p-value: | -1.440e+03 |
FDR: | NA |
Information Content per bp: | 1.747 |
Number of Target Sequences with motif | 540.0 |
Percentage of Target Sequences with motif | 30.79% |
Number of Background Sequences with motif | 415.3 |
Percentage of Background Sequences with motif | 0.96% |
Average Position of motif in Targets | 51.9 +/- 16.2bp |
Average Position of motif in Background | 48.9 +/- 41.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGAATATTC ATGAATATTC |
|
|
|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 2 |
Score: | 0.96 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGAATATTC ATGMATATDC |
|
|
|
unc-86/MA0926.1/Jaspar
Match Rank: | 3 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGAATATTC ATGCATAT-- |
|
|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 4 |
Score: | 0.84 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATGAATATTC-- CTCATGAATATTCAT |
|
|
|
vvl/dmmpmm(Pollard)/fly
Match Rank: | 5 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATGAATATTC -TGCATA--- |
|
|
|
vvl/MA0254.1/Jaspar
Match Rank: | 6 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGAATATTC -TGCATA--- |
|
|
|
vvl/dmmpmm(SeSiMCMC)/fly
Match Rank: | 7 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATGAATATTC -TGCATAA-- |
|
|
|
vvl/dmmpmm(Bigfoot)/fly
Match Rank: | 8 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGAATATTC -TGAATA--- |
|
|
|
PH0148.1_Pou3f3/Jaspar
Match Rank: | 9 |
Score: | 0.80 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----ATGAATATTC-- AAAATATGCATAATAAA |
|
|
|
KAN4/MA1028.1/Jaspar
Match Rank: | 10 |
Score: | 0.78 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATGAATATTC --GAATATTC |
|
|
|