Information for SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer (Motif 325)

A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G
Reverse Opposite:
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C
p-value:1e-6850
log p-value:-1.577e+04
FDR:NA
Information Content per bp:1.860
Number of Target Sequences with motif6221.0
Percentage of Target Sequences with motif43.94%
Number of Background Sequences with motif583.4
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GCAACAGGTG
GCAACAGGTG
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

SCRT2/MA0744.2/Jaspar

Match Rank:2
Score:0.98
Offset:-3
Orientation:forward strand
Alignment:---GCAACAGGTG---
AAAGCAACAGGTGGTT
 A C G T A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

SCRT1/MA0743.2/Jaspar

Match Rank:3
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---GCAACAGGTG---
AATTCAACAGGTGGTT
 A C G T A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

PL0017.1_hlh-2::hlh-10/Jaspar

Match Rank:4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GCAACAGGTG-----
CCGGAACAGGTGGTCGA
 A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A T G A C T G T G C A T C G A A G T C C G T A A C T G T A C G A C G T A C T G A C T G A C G T T A G C A C G T C T G A

sna/MA0086.2/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GCAACAGGTG---
GCAACAGGTGCAA
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
C A T G A G T C C T G A C T G A A T G C C T G A C T A G C A T G C A G T C A T G A G T C C G T A G T C A

SNAI3/MA1559.1/Jaspar

Match Rank:6
Score:0.84
Offset:2
Orientation:forward strand
Alignment:GCAACAGGTG--
--AACAGGTGCA
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T
A C G T A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A

esg/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GCAACAGGTG---
-NNACAGGTGCNN
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
A C G T G A C T C T A G C T G A G A T C C G T A C T A G A C T G A C G T T A C G A G T C C G T A A T C G

SNAI2/MA0745.2/Jaspar

Match Rank:8
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GCAACAGGTG---
NNGACAGGTGCNN
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

sna/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCAACAGGTG---
NNAACAGGTGCAN
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T A C G T
T C A G G C T A T C A G C T G A A T G C C G T A C T A G C T A G A C G T A C T G A G T C G T C A T A G C

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCAACAGGTG--
--AACAGGTGNT
 A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T A C G T
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T