p-value: | 1e-217 |
log p-value: | -5.007e+02 |
FDR: | NA |
Information Content per bp: | 1.624 |
Number of Target Sequences with motif | 310.0 |
Percentage of Target Sequences with motif | 6.51% |
Number of Background Sequences with motif | 241.6 |
Percentage of Background Sequences with motif | 0.54% |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN AAWCTAGGTCARDNN |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 2 |
Score: | 0.97 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN -AAYTAGGTCA---- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 3 |
Score: | 0.97 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN -AAYTAGGTCA---- |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
Match Rank: | 4 |
Score: | 0.97 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN WAABTAGGTCAV--- |
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RORC/MA1151.1/Jaspar
Match Rank: | 5 |
Score: | 0.96 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAWCTAGGTCARDNN ATAAGTAGGTCA---- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 6 |
Score: | 0.95 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAWCTAGGTCARDNN TATAAGTAGGTCAA--- |
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RORB/MA1150.1/Jaspar
Match Rank: | 7 |
Score: | 0.94 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN -AATTAGGTCAC--- |
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RORA/MA0071.1/Jaspar
Match Rank: | 8 |
Score: | 0.90 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN -ATCAAGGTCA---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 9 |
Score: | 0.83 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN -----AGGTCA---- |
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kni/MA0451.1/Jaspar
Match Rank: | 10 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAWCTAGGTCARDNN AAACTAGAGCAC--- |
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