p-value: | 1e-1293 |
log p-value: | -2.979e+03 |
FDR: | NA |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 4746.0 |
Percentage of Target Sequences with motif | 23.44% |
Number of Background Sequences with motif | 1916.2 |
Percentage of Background Sequences with motif | 6.53% |
Average Position of motif in Targets | 50.1 +/- 24.8bp |
Average Position of motif in Background | 51.2 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.12 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTTKCCTAGCAACM TGTTKCCTAGCAACM |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.85 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTTKCCTAGCAACM- ----SCCTAGCAACAG |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTTKCCTAGCAACM------ TGTGACCCTTAGCAACCGATTAA |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTTKCCTAGCAACM-- --CCGCATAGCAACGGA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTTKCCTAGCAACM-- --TACCATAGCAACGGT |
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RFX1/MA0509.2/Jaspar
Match Rank: | 6 |
Score: | 0.79 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTTKCCTAGCAACM- --TNCCATAGCAACNN |
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RFX1/MA0365.1/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TGTTKCCTAGCAACM -------TAGCAACC |
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RFX3/MA0798.2/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTTKCCTAGCAACM- --TNCCATAGCAACNN |
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RFX7/MA1554.1/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGTTKCCTAGCAACM ------NTAGCAACG |
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Stat4/MA0518.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTTKCCTAGCAACM NNNTTTCCTGGAAA-- |
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