p-value: | 1e-393 |
log p-value: | -9.059e+02 |
FDR: | NA |
Information Content per bp: | 1.661 |
Number of Target Sequences with motif | 354.0 |
Percentage of Target Sequences with motif | 39.03% |
Number of Background Sequences with motif | 650.3 |
Percentage of Background Sequences with motif | 1.44% |
Average Position of motif in Targets | 51.1 +/- 17.2bp |
Average Position of motif in Background | 49.5 +/- 34.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | SCCTAGCAACAG SCCTAGCAACAG |
|
|
|
RFX1/MA0509.2/Jaspar
Match Rank: | 2 |
Score: | 0.93 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --SCCTAGCAACAG TNCCATAGCAACNN |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.93 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --SCCTAGCAACAG- TACCATAGCAACGGT |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.92 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --SCCTAGCAACAG- CCGCATAGCAACGGA |
|
|
|
PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.91 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------SCCTAGCAACAG----- TGTGACCCTTAGCAACCGATTAA |
|
|
|
RFX3/MA0798.2/Jaspar
Match Rank: | 6 |
Score: | 0.90 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --SCCTAGCAACAG TNCCATAGCAACNN |
|
|
|
RFX1/MA0365.1/Jaspar
Match Rank: | 7 |
Score: | 0.89 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | SCCTAGCAACAG ---TAGCAACC- |
|
|
|
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 8 |
Score: | 0.85 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----SCCTAGCAACAG TGTTKCCTAGCAACM- |
|
|
|
RFX7/MA1554.1/Jaspar
Match Rank: | 9 |
Score: | 0.84 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | SCCTAGCAACAG --NTAGCAACG- |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---SCCTAGCAACAG TTGCCATGGCAACN- |
|
|
|