Information for PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer (Motif 294)

A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
Reverse Opposite:
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G
p-value:1e-1172
log p-value:-2.701e+03
FDR:NA
Information Content per bp:1.613
Number of Target Sequences with motif1987.0
Percentage of Target Sequences with motif43.46%
Number of Background Sequences with motif2497.0
Percentage of Background Sequences with motif5.76%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:YCCDNTCCAGGTTTT
YCCDNTCCAGGTTTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T

Prdm15/MA1616.1/Jaspar

Match Rank:2
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT---
---NNTCCAGGTTTTCCN
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA

Match Rank:3
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT-
---------GGTTTTC
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G A C G T A C G T A C G T A C G T A G T C

TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT-
--------AGGGTTTA
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C T A G A C G T A C G T A C G T C G T A

AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT
-----WWCYGGTTTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T C G A T G C T A T A G C A G T C A C T G A C T G C G A T C G A T C G A T G C A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT
-----TCCAGATGTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

AT1G76870/MA1367.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT----
-----TNCCGGTTTTNNTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T T A G C G A T C C T A G A C T G C A G T G C A T C G A T C G A T C T A G C A G T C G A T C G A T

MET31/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT
------CCACAGTTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T

MET32/Literature(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:YCCDNTCCAGGTTTT
------CCACAGTTT
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YCCDNTCCAGGTTTT-
---CATCCAGATGTTC
 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T
A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C