p-value: | |
log p-value: | -2.513e+03 |
FDR: | 0.000 |
Information Content per bp: | 1.590 |
Number of Target Sequences with motif | |
Percentage of Target Sequences with motif | |
Number of Background Sequences with motif | |
Percentage of Background Sequences with motif | |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGCCAAGCGTGACN GCAGCCAAGCGTGACN |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGCCAAGCGTGACN SCAGYCADGCATGAC- |
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PAX9/MA0781.1/Jaspar
Match Rank: | 3 |
Score: | 0.88 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCAGCCAAGCGTGACN TGCAGTCATGCGTGACG |
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sv/MA1461.1/Jaspar
Match Rank: | 4 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCAGCCAAGCGTGACN CGCAGTCATGCGTGACG |
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PAX1/MA0779.1/Jaspar
Match Rank: | 5 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCAGCCAAGCGTGACN NGCANTCATGCGTGACG |
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PAX6/MA0069.1/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGCCAAGCGTGACN -AANTCATGCGTGAA- |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 7 |
Score: | 0.72 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCAGCCAAGCGTGACN NGTGTTCAVTSAAGCGKAAA- |
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PAX5/MA0014.3/Jaspar
Match Rank: | 8 |
Score: | 0.71 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GCAGCCAAGCGTGACN-- ------GAGCGTGACCCC |
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prd-PD/dmmpmm(Bergman)/fly
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCAGCCAAGCGTGACN--- --TGTCAACCGTGACGANA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCAGCCAAGCGTGACN --------NCGTGACN |
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