Information for Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer (Motif 241)

A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
Reverse Opposite:
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C
p-value:1e-726
log p-value:-1.673e+03
FDR:NA
Information Content per bp:1.735
Number of Target Sequences with motif3223.0
Percentage of Target Sequences with motif47.60%
Number of Background Sequences with motif6298.9
Percentage of Background Sequences with motif17.13%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GKTAATGR
GKTAATGR
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

bsh/MA0214.1/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GKTAATGR
-TTAATTG
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G

NKX6-2/MA0675.1/Jaspar

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:GKTAATGR-
-TTAATTAN
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T
A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXC4/MA1504.1/Jaspar

Match Rank:4
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GKTAATGR-
-NTAATGAN
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T
A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

btn/MA0215.1/Jaspar

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GKTAATGR
-TTAATGA
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C G T C G A T A C G T C T G A C G T A A G C T A C T G C T G A

HOXD4/MA1507.1/Jaspar

Match Rank:6
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GKTAATGR-
-NTAATGAN
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T
A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GKTAATGR--
NNTAATTANN
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

ems/MA0219.1/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GKTAATGR
-TTAATGA
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C G T G A C T C G A T C G T A C T G A A C G T A C T G C T G A

Dfd/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GKTAATGR
-TTAATTA
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C G T G C A T A C G T C G T A G T C A C G A T C A G T C T G A

HGTX/MA0191.1/Jaspar

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GKTAATGR
-TTAATTA
 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A
A C G T C G A T A C G T C G T A C G T A A C G T C A G T C T G A