p-value: | |
log p-value: | -1.325e+04 |
FDR: | 0.000 |
Information Content per bp: | 1.599 |
Number of Target Sequences with motif | |
Percentage of Target Sequences with motif | |
Number of Background Sequences with motif | |
Percentage of Background Sequences with motif | |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTTGGCANNNTGCCAA CTTGGCANNNTGCCAA |
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NFIX(var.2)/MA1528.1/Jaspar
Match Rank: | 2 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTGGCANNNTGCCAA- NNTGGCACNNTGCCAAN |
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NFIC(var.2)/MA1527.1/Jaspar
Match Rank: | 3 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTGGCANNNTGCCAA- NTTGGCACNNNGCCAAN |
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NFIB/MA1643.1/Jaspar
Match Rank: | 4 |
Score: | 0.93 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTTGGCANNNTGCCAA--- NNCTTGGCACNATGCCAGGNN |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.92 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTTGGCANNNTGCCAA -CTGGCAGNCTGCCA- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 6 |
Score: | 0.91 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTTGGCANNNTGCCAA -TTGGCATGGTGCCA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTGGCANNNTGCCAA NTTGGCANN------- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTGGCANNNTGCCAA NNTTGGCANN------- |
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NFIC/MA0161.2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTTGGCANNNTGCCAA TACTTGGCAGA------- |
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RIM101/Literature(Harbison)/Yeast
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTGGCANNNTGCCAA CTTGGCA--------- |
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