Information for Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer (Motif 211)

G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G
Reverse Opposite:
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G
p-value:1e-125
log p-value:-2.899e+02
FDR:NA
Information Content per bp:1.681
Number of Target Sequences with motif248.0
Percentage of Target Sequences with motif14.49%
Number of Background Sequences with motif915.5
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCAAAAATAG
CCAAAAATAG
 G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAAATAG-
KCCAAAAATAGC
 A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CCAAAAATAG-
DCYAAAAATAGM
 A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---CCAAAAATAG--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAAATAG-
GCTAAAAATAGC
 A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--CCAAAAATAG---
TTCTAAAAATAGAAA
 A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CCAAAAATAG-
ACTATAAATAGA
 A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCAAAAATAG-
GCTATAAATAGC
 A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

br(var.2)/MA0011.1/Jaspar

Match Rank:9
Score:0.85
Offset:4
Orientation:reverse strand
Alignment:CCAAAAATAG--
----AAATAGTA
 G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C T A G T C A A C G T C T G A C T A G C G A T C G T A

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CCAAAAATAG
CTAAAAATAA
 G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A