p-value: | |
log p-value: | -8.147e+02 |
FDR: | 0.000 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | |
Percentage of Target Sequences with motif | |
Number of Background Sequences with motif | |
Percentage of Background Sequences with motif | |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA GGGTTACTANAGGTCA |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 2 |
Score: | 0.97 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGTTACTANAGGTCA NNGAGGTTACTNNAGGTCA |
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THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer
Match Rank: | 3 |
Score: | 0.83 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA -GGTCACCTGAGGTCA |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 4 |
Score: | 0.83 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTTACTANAGGTCA AAGGTCACGAAAGGTCA |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 5 |
Score: | 0.81 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA -GGTCANYTGAGGWCA |
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THRB(var.3)/MA1576.1/Jaspar
Match Rank: | 6 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGGTTACTANAGGTCA- TAAGGTCACGTNAGGTCAC |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA --------TRAGGTCA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA ----------AGGTCA |
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NR2C1/MA1535.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA- --------CGAGGTCAC |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GGGTTACTANAGGTCA --------AGRGGTCA |
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