Information for Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer (Motif 182)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.482e+03
Information Content per bp:1.625
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:RSCACTYRAG
RSCACTYRAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RSCACTYRAG
AASCACTCAA-

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RSCACTYRAG
NSCACTYVAV

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:RSCACTYRAG
-CCACTTGAA

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-RSCACTYRAG
MRSCACTYAA-

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.91
Offset:0
Orientation:forward strand
Alignment:RSCACTYRAG
ACCACTTGAA

vnd/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--RSCACTYRAG--
NNNCCACTTNACAN

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-RSCACTYRAG
AGCCACTCAAG

tin/MA0247.2/Jaspar

Match Rank:9
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RSCACTYRAG-
-CCACTTGANA

ceh-22/MA0264.1/Jaspar

Match Rank:10
Score:0.87
Offset:0
Orientation:forward strand
Alignment:RSCACTYRAG-
ACCACTTGAAA