Information for HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer (Motif 176)

G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
Reverse Opposite:
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A
p-value:1e-1925
log p-value:-4.434e+03
FDR:NA
Information Content per bp:1.674
Number of Target Sequences with motif1831.0
Percentage of Target Sequences with motif33.65%
Number of Background Sequences with motif600.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAABNTTCTA
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAANMTTCTA
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G C A T C G A T A T G C A G C T T C G A T A C G G C T A C G T A C A T G T G A C G C A T C G A T A G T C A G C T C G T A

HSFB2B/MA1666.1/Jaspar

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAAGCTTCT-
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G C A T G A C T A G T C A G C T T C G A A T C G G C T A C G T A A C T G A T G C G C A T G C A T G A T C A G C T A C G T

HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-TTCTAGAABNTTCTA
NTTCTAGAANCTTCY-
 A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G T A C G C A T C G A T A T G C A G C T T C G A T A C G C G T A C G T A C A T G T A G C G C A T G A C T G T A C A G C T A C G T

AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.98
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAAKCTTCTA
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
C G A T A C G T G T A C A G C T C T G A A C T G C G T A C T G A A C T G T G A C C G A T A C G T A G T C A G C T C T G A

HSFA6B/MA1664.1/Jaspar

Match Rank:6
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TTCTAGAABNTTCTA
CTTCTAGAANCTTCT-
 A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
A G T C G C A T C G A T A T G C A G C T T C G A A T C G G C T A C G T A A C T G T A G C G C A T G C A T G T A C A G C T A C G T

HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TTCTAGAABNTTCTA
HTTCTAGAADCTTCT-
 A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G A T C G C A T G C A T A G T C A G C T T C G A T A C G G C T A C G T A C T A G T G A C G C A T C G A T G A T C A G C T A C G T

HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAAGCTTCTA
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G C A T G A C T A T G C A G C T T C G A A C T G C G T A C G T A A T C G A T G C G C A T G A C T G A T C A G C T T C G A

HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TTCTAGAABNTTCTA
TTCTAGAAGCTTCTA
 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G C A T G C A T G A T C G A C T T C G A T C A G G C T A C G T A A C T G G T A C G C A T G C A T A G T C A G C T C G T A

HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TTCTAGAABNTTCTA
NTTCTAGAANHTTCT-
 A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A
G C A T G C A T G C A T A T G C A G C T T C G A T A C G G C T A C G T A C A T G G T A C G C A T G C A T A G T C A G C T A C G T