p-value: | 1e-940 |
log p-value: | -2.166e+03 |
FDR: | NA |
Information Content per bp: | 1.713 |
Number of Target Sequences with motif | 1175.0 |
Percentage of Target Sequences with motif | 15.51% |
Number of Background Sequences with motif | 430.2 |
Percentage of Background Sequences with motif | 1.04% |
Average Position of motif in Targets | 0 +/- 0bp |
Average Position of motif in Background | 0 +/- 0bp |
Strand Bias (log2 ratio + to - strand density) | 0 |
Multiplicity (# of sites on avg that occur together) | 1 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYCATCMATCAT GYCATCMATCAT |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
Match Rank: | 2 |
Score: | 0.97 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GYCATCMATCAT -YCATCMATCA- |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GYCATCMATCAT -TCATCAATCA- |
|
|
|
MEIS1(var.2)/MA1639.1/Jaspar
Match Rank: | 4 |
Score: | 0.93 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYCATCMATCAT- GTCATCAATCATT |
|
|
|
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer
Match Rank: | 5 |
Score: | 0.93 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GYCATCMATCAT --CATYAATCAT |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 6 |
Score: | 0.91 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GYCATCMATCAT RGCCATYAATCA- |
|
|
|
PBX1/MA0070.1/Jaspar
Match Rank: | 7 |
Score: | 0.89 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GYCATCMATCAT- -CCATCAATCAAA |
|
|
|
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
Match Rank: | 8 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GYCATCMATCAT NCYATMAATCAY |
|
|
|
MEIS2(var.2)/MA1640.1/Jaspar
Match Rank: | 9 |
Score: | 0.84 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GYCATCMATCAT-- NNCCATAAATCATNN |
|
|
|
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer
Match Rank: | 10 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GYCATCMATCAT ---WTCCATCA- |
|
|
|