p-value: | 1e-2144 |
log p-value: | -4.937e+03 |
FDR: | NA |
Information Content per bp: | 1.601 |
Number of Target Sequences with motif | 12932.0 |
Percentage of Target Sequences with motif | 22.45% |
Number of Background Sequences with motif | 4829.7 |
Percentage of Background Sequences with motif | 8.74% |
Average Position of motif in Targets | 50.3 +/- 25.9bp |
Average Position of motif in Background | 49.5 +/- 32.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
Match Rank: | 1 |
Score: | 1.00 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CYHATAAAAN CYHATAAAAN |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
Match Rank: | 2 |
Score: | 0.98 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN NCYAATAAAA- |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
Match Rank: | 3 |
Score: | 0.96 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN VGCCATAAAA- |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 4 |
Score: | 0.96 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN NCYAATAAAA- |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
Match Rank: | 5 |
Score: | 0.95 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CYHATAAAAN KGCCATAAAA- |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 6 |
Score: | 0.93 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CYHATAAAAN CCYMATAAAA- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 7 |
Score: | 0.93 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN- NGYCATAAAWCH |
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Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
Match Rank: | 8 |
Score: | 0.93 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN GGCMATGAAA- |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 9 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CYHATAAAAN NGCAATTAAA- |
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Abd-B/MA0165.1/Jaspar
Match Rank: | 10 |
Score: | 0.91 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CYHATAAAAN -TCATAAA-- |
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