Information for GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer (Motif 131)

C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
Reverse Opposite:
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T
p-value:1e-315
log p-value:-7.258e+02
FDR:NA
Information Content per bp:1.562
Number of Target Sequences with motif607.0
Percentage of Target Sequences with motif8.87%
Number of Background Sequences with motif480.8
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets101.3 +/- 39.9bp
Average Position of motif in Background100.4 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNNNNBAGATAWYATCTVHN
NNNNNBAGATAWYATCTVHN
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:NNNNNBAGATAWYATCTVHN---
-NNNNNCGATANNATCTNNNNAN
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T A C G T A C G T A C G T
A C G T C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.80
Offset:5
Orientation:forward strand
Alignment:NNNNNBAGATAWYATCTVHN
-----ATGATCGAATCAAA-
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A A C G T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:4
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:NNNNNBAGATAWYATCTVHN
----NTTGATTGAATCWGV-
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G A C G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:5
Score:0.70
Offset:6
Orientation:forward strand
Alignment:NNNNNBAGATAWYATCTVHN
------AGATAAGANN----
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C A C G T A C G T A C G T A C G T

At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:NNNNNBAGATAWYATCTVHN
----HCAGATAWMACCTSN-
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T G A T C A G T C C G T A C T A G C T G A A C G T C T G A G C T A G T A C C T G A G T A C A G T C A G C T T A C G G T A C A C G T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:7
Score:0.69
Offset:7
Orientation:forward strand
Alignment:NNNNNBAGATAWYATCTVHN
-------GATTGCATCA---
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A C G T A C G T C A T G A G T C C T G A C G A T A G T C C G T A A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:8
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:NNNNNBAGATAWYATCTVHN
-----NTGATTAAATTAN--
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T

GATA6/MA1104.2/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:NNNNNBAGATAWYATCTVHN
----NNAGATAAGATAN---
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.67
Offset:6
Orientation:forward strand
Alignment:NNNNNBAGATAWYATCTVHN
------AGATAASR------
 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T